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PHYS40110

Academic Year 2024/2025

Analysis of protein expression - Western Blot (PHYS40110)

Subject:
Physiology
College:
Health & Agricultural Sciences
School:
Medicine
Level:
4 (Masters)
Credits:
5
Module Coordinator:
Assoc Professor John Baugh
Trimester:
Autumn&Spring&Summer(separate)
Mode of Delivery:
On Campus
Internship Module:
No
How will I be graded?
Letter grades

Curricular information is subject to change.

This module is designed to provide an introduction to antibody-based techniques for quantifying protein expression in samples derived from cultured cells or tissues with an emphasis on assay design and development. The primary aim of this module is to give students hands-on laboratory experience in Western Blotting, and an understanding of the various controls that are necessary to ensure reliable data.

About this Module

Learning Outcomes:

On completion of this module, students are expected to be able to:
1. Describe the basic principles of cellular protein production and protein quantification with an emphasis on Western Blotting. These include, but are not limited to, the following topics:

a. Gene transcription and translation

b. Intracellular protein processing and post-translational modifications

c. Protein isolation
i. Cell cultures vs tissue
ii. Protein stability

d. Quantification of total protein
i. Bradford assay, BCA assay

e. Protein separation techniques
i. Polyacrylamide gel electrophoresis
1. Buffer selection and gel density
2. Denaturing or native conditions
f. Transfer of separated proteins to membrane

g. Protein staining techniques
i. In gel staining (coomassie)
ii. Non-specific protein stain (Ponceau)
iii. Antibody-mediated staining

h. Protein quantification
i. Importance of normalising for protein loading
ii. Limitations of dynamic range

2. Demonstrate laboratory competence in performing tasks relating to Learning Outcome 1.

Student Effort Hours:
Student Effort Type Hours
Autonomous Student Learning

40

Tutorial

12

Laboratories

60

Total

112


Approaches to Teaching and Learning:
This module involves approximately ten weeks of laboratory-based practical activity.
Students will work closely with a research active supervisor.
Teaching will involve laboratory work; active/task-based learning; critical writing; reflective learning; enquiry & problem-based learning.

Requirements, Exclusions and Recommendations

Not applicable to this module.


Module Requisites and Incompatibles
Not applicable to this module.
 

Assessment Strategy  
Description Timing Component Scale Must Pass Component % of Final Grade In Module Component Repeat Offered
Report(s): Laboratory Report Week 12 Graded No

100

No

Carry forward of passed components
No
 

Remediation Type Remediation Timing
Repeat Within Two Trimesters
Please see Student Jargon Buster for more information about remediation types and timing. 

Feedback Strategy/Strategies

• Feedback individually to students, post-assessment

How will my Feedback be Delivered?

Individual feedback will be available after the laboratory reports have been graded.